Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 NEFHP1-201ENST00000412845 2629 ntBASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 ZNF815P-204ENST00000434898 1737 ntBASIC19.71■□□□□ 0.75
CHMP2BQ9UQN3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 AC141586.3-201ENST00000562166 1838 ntBASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 AC005829.2-201ENST00000571422 1056 ntBASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
CHMP2BQ9UQN3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 CROCCP3-202ENST00000420820 1947 ntBASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 AC073210.2-201ENST00000430369 194 ntBASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 AC026185.1-201ENST00000445748 174 ntBASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 AC006557.6-201ENST00000623071 864 ntBASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.69■□□□□ 0.74
CHMP2BQ9UQN3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 DUSP5P2-201ENST00000426873 1033 ntBASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP2BQ9UQN3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 CROCCP5-201ENST00000436658 830 ntBASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHMP2BQ9UQN3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms