Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 AL160286.2-201ENST00000567150 934 ntBASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ZC3H4Q9UPT8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZC3H4Q9UPT8 PHGDH-210ENST00000641115 1638 ntBASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 SLC25A6P4-201ENST00000586535 553 ntBASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3H4Q9UPT8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 AC034232.1-201ENST00000506026 1064 ntBASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 KRT8P8-201ENST00000434750 1448 ntBASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3H4Q9UPT8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 AP002414.4-201ENST00000589764 1148 ntBASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.48■■□□□ 1.35
ZC3H4Q9UPT8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 AP002469.2-201ENST00000531724 424 ntBASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 AL121772.3-201ENST00000610840 674 ntBASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3H4Q9UPT8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 AC079781.3-201ENST00000449110 356 ntBASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 RASA4DP-201ENST00000460726 1199 ntBASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 AL671883.3-201ENST00000603274 991 ntBASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 TMEM179-206ENST00000616017 1645 ntBASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3H4Q9UPT8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
ZC3H4Q9UPT8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
ZC3H4Q9UPT8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3H4Q9UPT8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3H4Q9UPT8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms