Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EBF1Q9UH73 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
EBF1Q9UH73 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.74■□□□□ 0.75
EBF1Q9UH73 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.74■□□□□ 0.75
EBF1Q9UH73 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EBF1Q9UH73 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.74■□□□□ 0.75
EBF1Q9UH73 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.74■□□□□ 0.75
EBF1Q9UH73 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.74■□□□□ 0.75
EBF1Q9UH73 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.74■□□□□ 0.75
EBF1Q9UH73 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
EBF1Q9UH73 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EBF1Q9UH73 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
EBF1Q9UH73 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
EBF1Q9UH73 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
EBF1Q9UH73 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
EBF1Q9UH73 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.73■□□□□ 0.75
EBF1Q9UH73 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 INGX-201ENST00000359239 846 ntBASIC19.73■□□□□ 0.75
EBF1Q9UH73 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
EBF1Q9UH73 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.73■□□□□ 0.75
EBF1Q9UH73 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
EBF1Q9UH73 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
EBF1Q9UH73 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.73■□□□□ 0.75
EBF1Q9UH73 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
EBF1Q9UH73 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.72■□□□□ 0.75
EBF1Q9UH73 AC092720.2-201ENST00000602388 1665 ntBASIC19.72■□□□□ 0.75
EBF1Q9UH73 FEM1AP1-201ENST00000431297 1995 ntBASIC19.72■□□□□ 0.75
EBF1Q9UH73 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.72■□□□□ 0.75
EBF1Q9UH73 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.72■□□□□ 0.75
EBF1Q9UH73 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
EBF1Q9UH73 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.72■□□□□ 0.75
EBF1Q9UH73 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
EBF1Q9UH73 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
EBF1Q9UH73 SLC25A1P4-201ENST00000567977 778 ntBASIC19.72■□□□□ 0.75
EBF1Q9UH73 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.72■□□□□ 0.75
EBF1Q9UH73 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.72■□□□□ 0.75
EBF1Q9UH73 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 AC087289.5-201ENST00000586076 3175 ntBASIC19.72■□□□□ 0.75
EBF1Q9UH73 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF1Q9UH73 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.72■□□□□ 0.75
EBF1Q9UH73 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 FAM8A6P-201ENST00000407496 1135 ntBASIC19.71■□□□□ 0.75
EBF1Q9UH73 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 AC091390.4-202ENST00000476426 537 ntBASIC19.71■□□□□ 0.75
EBF1Q9UH73 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 AL138966.2-201ENST00000621997 464 ntBASIC19.71■□□□□ 0.75
EBF1Q9UH73 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 AC116562.4-202ENST00000641738 218 ntBASIC19.71■□□□□ 0.75
EBF1Q9UH73 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.71■□□□□ 0.75
EBF1Q9UH73 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF1Q9UH73 AC096733.2-201ENST00000609937 1394 ntBASIC19.7■□□□□ 0.74
EBF1Q9UH73 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF1Q9UH73 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF1Q9UH73 RCC2P6-201ENST00000526625 1557 ntBASIC19.7■□□□□ 0.74
EBF1Q9UH73 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF1Q9UH73 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.7■□□□□ 0.74
EBF1Q9UH73 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF1Q9UH73 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.7■□□□□ 0.74
EBF1Q9UH73 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF1Q9UH73 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF1Q9UH73 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF1Q9UH73 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms