Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD3Q9UBI1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 UNC93B3-201ENST00000308076 687 ntBASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 AC099791.1-201ENST00000416440 715 ntBASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 PGM5P4-201ENST00000421970 445 ntBASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 AC105265.2-201ENST00000467189 838 ntBASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.04■□□□□ 0.32
COMMD3Q9UBI1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 Z98044.1-201ENST00000632503 1764 ntBASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 TPRG1LP1-201ENST00000598702 760 ntBASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 TEX21P-204ENST00000641479 1693 ntBASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 PTBP1P-201ENST00000554374 1601 ntBASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 AC141586.3-201ENST00000562166 1838 ntBASIC17.03■□□□□ 0.32
COMMD3Q9UBI1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 AC024257.2-201ENST00000549699 147 ntBASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 AL355001.2-201ENST00000620617 1191 ntBASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COMMD3Q9UBI1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COMMD3Q9UBI1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms