Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 BX664615.1-201ENST00000443558 458 ntBASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 AC087388.1-201ENST00000571370 1112 ntBASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NLGN3Q9NZ94 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 INGX-201ENST00000359239 846 ntBASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 SLC25A1P2-201ENST00000430693 912 ntBASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 WWOX-216ENST00000569818 525 ntBASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 AP005212.1-201ENST00000581547 1997 ntBASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NLGN3Q9NZ94 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 AC091390.4-202ENST00000476426 537 ntBASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 AP001271.2-201ENST00000624018 1556 ntBASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NLGN3Q9NZ94 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 AK4P3-201ENST00000418260 669 ntBASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 Z85996.1-201ENST00000494644 937 ntBASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 LINC01238-205ENST00000567549 1107 ntBASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 AC092667.1-201ENST00000434301 2586 ntBASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NLGN3Q9NZ94 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms