Protein–RNA interactions for Protein: Q9NZ63

C9orf78, Telomere length and silencing protein 1 homolog, humanhuman

Predicted RBP Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78Q9NZ63 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 AC130371.2-201ENST00000619443 611 ntBASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
C9orf78Q9NZ63 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 MMP23A-201ENST00000234610 1017 ntBASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 AC087499.1-201ENST00000418141 1075 ntBASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 Z85996.1-201ENST00000494644 937 ntBASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C9orf78Q9NZ63 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 MIR1238-201ENST00000408483 83 ntBASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 AC211429.1-201ENST00000415277 523 ntBASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 AC004951.3-201ENST00000418645 1148 ntBASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 AC011298.2-201ENST00000617989 482 ntBASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.33■■□□□ 1.49
C9orf78Q9NZ63 AC125437.2-201ENST00000625180 2167 ntBASIC24.33■■□□□ 1.48
C9orf78Q9NZ63 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
C9orf78Q9NZ63 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
C9orf78Q9NZ63 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 AL390955.1-201ENST00000428694 934 ntBASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 AC008040.2-201ENST00000461049 708 ntBASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 AC073130.3-201ENST00000624389 2278 ntBASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
C9orf78Q9NZ63 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC24.31■■□□□ 1.48
C9orf78Q9NZ63 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 AC091390.4-202ENST00000476426 537 ntBASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.3■■□□□ 1.48
C9orf78Q9NZ63 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms