Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC131212.4-201ENST00000623606 975 ntBASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.7■□□□□ 0.58
SPHK1Q9NYA1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 MESTP1-201ENST00000404287 994 ntBASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 AC011506.1-201ENST00000474329 610 ntBASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SPHK1Q9NYA1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 AC116562.2-201ENST00000507042 360 ntBASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 AL160286.2-201ENST00000567150 934 ntBASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK1Q9NYA1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 Z85996.1-201ENST00000494644 937 ntBASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 AC026271.3-201ENST00000571884 352 ntBASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK1Q9NYA1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 ZNF815P-204ENST00000434898 1737 ntBASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 AC104417.2-201ENST00000562989 1793 ntBASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 AC008040.2-201ENST00000461049 708 ntBASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 B3GAT3P1-201ENST00000471720 806 ntBASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.66■□□□□ 0.58
SPHK1Q9NYA1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms