Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.3■■□□□ 1
TRMT13Q9NUP7 TPM4P1-201ENST00000436100 807 ntBASIC21.3■■□□□ 1
TRMT13Q9NUP7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.3■■□□□ 1
TRMT13Q9NUP7 HCG4P8-203ENST00000443049 980 ntBASIC21.3■■□□□ 1
TRMT13Q9NUP7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.3■■□□□ 1
TRMT13Q9NUP7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.3■■□□□ 1
TRMT13Q9NUP7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.3■■□□□ 1
TRMT13Q9NUP7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRMT13Q9NUP7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.3■■□□□ 1
TRMT13Q9NUP7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRMT13Q9NUP7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRMT13Q9NUP7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.29■■□□□ 1
TRMT13Q9NUP7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.29■■□□□ 1
TRMT13Q9NUP7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.29■■□□□ 1
TRMT13Q9NUP7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.29■■□□□ 1
TRMT13Q9NUP7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
TRMT13Q9NUP7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.29■■□□□ 1
TRMT13Q9NUP7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRMT13Q9NUP7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 VENTXP5-201ENST00000523979 775 ntBASIC21.28■■□□□ 1
TRMT13Q9NUP7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRMT13Q9NUP7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRMT13Q9NUP7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.27■■□□□ 1
TRMT13Q9NUP7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.27■■□□□ 1
TRMT13Q9NUP7 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.27■■□□□ 1
TRMT13Q9NUP7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRMT13Q9NUP7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRMT13Q9NUP7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRMT13Q9NUP7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRMT13Q9NUP7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRMT13Q9NUP7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRMT13Q9NUP7 AC112907.2-201ENST00000448639 330 ntBASIC21.27■■□□□ 1
TRMT13Q9NUP7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRMT13Q9NUP7 AC069148.1-201ENST00000608741 768 ntBASIC21.27■■□□□ 1
TRMT13Q9NUP7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.27■■□□□ 1
TRMT13Q9NUP7 KRT8P11-201ENST00000409686 1436 ntBASIC21.27■■□□□ 1
TRMT13Q9NUP7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRMT13Q9NUP7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRMT13Q9NUP7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
TRMT13Q9NUP7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.27■□□□□ 0.99
TRMT13Q9NUP7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.26■□□□□ 0.99
TRMT13Q9NUP7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.26■□□□□ 0.99
TRMT13Q9NUP7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRMT13Q9NUP7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
TRMT13Q9NUP7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRMT13Q9NUP7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRMT13Q9NUP7 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.26■□□□□ 0.99
TRMT13Q9NUP7 AL450487.1-201ENST00000426799 995 ntBASIC21.26■□□□□ 0.99
TRMT13Q9NUP7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms