Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.43■□□□□ 0.86
GDF3Q9NR23 PGM5P4-201ENST00000421970 445 ntBASIC20.43■□□□□ 0.86
GDF3Q9NR23 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.43■□□□□ 0.86
GDF3Q9NR23 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.43■□□□□ 0.86
GDF3Q9NR23 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
GDF3Q9NR23 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GDF3Q9NR23 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDF3Q9NR23 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 KRT18P68-201ENST00000392293 1000 ntBASIC20.42■□□□□ 0.86
GDF3Q9NR23 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GDF3Q9NR23 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.42■□□□□ 0.86
GDF3Q9NR23 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GDF3Q9NR23 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.41■□□□□ 0.86
GDF3Q9NR23 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 AC009113.1-201ENST00000570267 2443 ntBASIC20.41■□□□□ 0.86
GDF3Q9NR23 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.41■□□□□ 0.86
GDF3Q9NR23 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 UNC93B4-201ENST00000505679 747 ntBASIC20.41■□□□□ 0.86
GDF3Q9NR23 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.41■□□□□ 0.86
GDF3Q9NR23 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GDF3Q9NR23 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
GDF3Q9NR23 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.41■□□□□ 0.86
GDF3Q9NR23 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GDF3Q9NR23 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.41■□□□□ 0.86
GDF3Q9NR23 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 KRT16P6-202ENST00000425692 1426 ntBASIC20.4■□□□□ 0.86
GDF3Q9NR23 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.4■□□□□ 0.86
GDF3Q9NR23 AL161938.1-201ENST00000569833 2180 ntBASIC20.4■□□□□ 0.86
GDF3Q9NR23 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GDF3Q9NR23 AC104581.1-202ENST00000635932 2618 ntBASIC20.4■□□□□ 0.86
GDF3Q9NR23 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
GDF3Q9NR23 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GDF3Q9NR23 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
GDF3Q9NR23 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.39■□□□□ 0.86
GDF3Q9NR23 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GDF3Q9NR23 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GDF3Q9NR23 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
GDF3Q9NR23 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
GDF3Q9NR23 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms