Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 AL158211.5-201ENST00000623583 2518 ntBASIC20.32■□□□□ 0.84
CD248Q9HCU0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 AC124283.5-201ENST00000624661 1809 ntBASIC20.32■□□□□ 0.84
CD248Q9HCU0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.32■□□□□ 0.84
CD248Q9HCU0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD248Q9HCU0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 PRKY-204ENST00000533551 1019 ntBASIC20.31■□□□□ 0.84
CD248Q9HCU0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.31■□□□□ 0.84
CD248Q9HCU0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD248Q9HCU0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
CD248Q9HCU0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.3■□□□□ 0.84
CD248Q9HCU0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.3■□□□□ 0.84
CD248Q9HCU0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.3■□□□□ 0.84
CD248Q9HCU0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 MIR4785-201ENST00000585005 73 ntBASIC20.3■□□□□ 0.84
CD248Q9HCU0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.3■□□□□ 0.84
CD248Q9HCU0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.3■□□□□ 0.84
CD248Q9HCU0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD248Q9HCU0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms