Protein–RNA interactions for Protein: Q9H4I9

SMDT1, Essential MCU regulator, mitochondrial, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1Q9H4I9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 AC005224.4-201ENST00000583262 1652 ntBASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 FAM21FP-204ENST00000608637 956 ntBASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 TNRC18P3-201ENST00000441896 2691 ntBASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.19■□□□□ 0.02
SMDT1Q9H4I9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMDT1Q9H4I9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 AC010997.5-201ENST00000609182 354 ntBASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SMDT1Q9H4I9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 AC012317.2-201ENST00000623305 2251 ntBASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMDT1Q9H4I9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms