Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.88■□□□□ 0.61
PKP4Q99569 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PKP4Q99569 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.88■□□□□ 0.61
PKP4Q99569 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PKP4Q99569 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PKP4Q99569 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.87■□□□□ 0.61
PKP4Q99569 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.87■□□□□ 0.61
PKP4Q99569 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
PKP4Q99569 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.87■□□□□ 0.61
PKP4Q99569 GCSHP5-201ENST00000443090 522 ntBASIC18.87■□□□□ 0.61
PKP4Q99569 AL158047.1-201ENST00000445918 881 ntBASIC18.87■□□□□ 0.61
PKP4Q99569 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PKP4Q99569 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PKP4Q99569 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.87■□□□□ 0.61
PKP4Q99569 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.87■□□□□ 0.61
PKP4Q99569 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.87■□□□□ 0.61
PKP4Q99569 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.87■□□□□ 0.61
PKP4Q99569 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.87■□□□□ 0.61
PKP4Q99569 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PKP4Q99569 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 TMEM191A-211ENST00000637163 1067 ntBASIC18.87■□□□□ 0.61
PKP4Q99569 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP4Q99569 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.86■□□□□ 0.61
PKP4Q99569 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PKP4Q99569 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PKP4Q99569 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.86■□□□□ 0.61
PKP4Q99569 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.86■□□□□ 0.61
PKP4Q99569 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.86■□□□□ 0.61
PKP4Q99569 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PKP4Q99569 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.86■□□□□ 0.61
PKP4Q99569 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PKP4Q99569 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.86■□□□□ 0.61
PKP4Q99569 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PKP4Q99569 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 AC104417.2-201ENST00000562989 1793 ntBASIC18.86■□□□□ 0.61
PKP4Q99569 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP4Q99569 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP4Q99569 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP4Q99569 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
PKP4Q99569 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PKP4Q99569 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PKP4Q99569 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.85■□□□□ 0.61
PKP4Q99569 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP4Q99569 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.85■□□□□ 0.61
PKP4Q99569 HLA-A-209ENST00000638375 975 ntBASIC18.85■□□□□ 0.61
PKP4Q99569 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.85■□□□□ 0.61
PKP4Q99569 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PKP4Q99569 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.85■□□□□ 0.61
PKP4Q99569 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PKP4Q99569 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.84■□□□□ 0.61
PKP4Q99569 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.84■□□□□ 0.61
PKP4Q99569 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PKP4Q99569 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 HTR7P1-201ENST00000538670 1336 ntBASIC18.84■□□□□ 0.61
PKP4Q99569 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PKP4Q99569 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PKP4Q99569 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PKP4Q99569 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.84■□□□□ 0.61
PKP4Q99569 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.84■□□□□ 0.61
PKP4Q99569 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PKP4Q99569 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.84■□□□□ 0.61
PKP4Q99569 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms