Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TWNKQ96RR1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TWNKQ96RR1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TWNKQ96RR1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TWNKQ96RR1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TWNKQ96RR1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TWNKQ96RR1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TWNKQ96RR1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TWNKQ96RR1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 AL160286.2-201ENST00000567150 934 ntBASIC20.59■□□□□ 0.89
TWNKQ96RR1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TWNKQ96RR1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.59■□□□□ 0.89
TWNKQ96RR1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TWNKQ96RR1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TWNKQ96RR1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 AC116562.4-201ENST00000641316 2276 ntBASIC20.58■□□□□ 0.89
TWNKQ96RR1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TWNKQ96RR1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TWNKQ96RR1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TWNKQ96RR1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TWNKQ96RR1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TWNKQ96RR1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TWNKQ96RR1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TWNKQ96RR1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.58■□□□□ 0.89
TWNKQ96RR1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TWNKQ96RR1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TWNKQ96RR1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.58■□□□□ 0.88
TWNKQ96RR1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TWNKQ96RR1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.58■□□□□ 0.88
TWNKQ96RR1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 MESTP1-201ENST00000404287 994 ntBASIC20.57■□□□□ 0.88
TWNKQ96RR1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 MIR4497-201ENST00000583208 89 ntBASIC20.57■□□□□ 0.88
TWNKQ96RR1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 AP001412.1-201ENST00000608405 714 ntBASIC20.57■□□□□ 0.88
TWNKQ96RR1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TWNKQ96RR1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.57■□□□□ 0.88
TWNKQ96RR1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TWNKQ96RR1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TWNKQ96RR1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TWNKQ96RR1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 AC008040.2-201ENST00000461049 708 ntBASIC20.56■□□□□ 0.88
TWNKQ96RR1 AC011506.1-201ENST00000474329 610 ntBASIC20.56■□□□□ 0.88
TWNKQ96RR1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 AC026471.5-201ENST00000615068 467 ntBASIC20.56■□□□□ 0.88
TWNKQ96RR1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TWNKQ96RR1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TWNKQ96RR1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 KRT8P41-201ENST00000533985 1514 ntBASIC20.56■□□□□ 0.88
TWNKQ96RR1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TWNKQ96RR1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
TWNKQ96RR1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TWNKQ96RR1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TWNKQ96RR1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TWNKQ96RR1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TWNKQ96RR1 TSPY15P-201ENST00000457163 923 ntBASIC20.55■□□□□ 0.88
TWNKQ96RR1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms