Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1AQ96P16 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20■□□□□ 0.79
RPRD1AQ96P16 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1AQ96P16 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20■□□□□ 0.79
RPRD1AQ96P16 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1AQ96P16 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPRD1AQ96P16 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20■□□□□ 0.79
RPRD1AQ96P16 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20■□□□□ 0.79
RPRD1AQ96P16 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RPRD1AQ96P16 AC131212.4-201ENST00000623606 975 ntBASIC20■□□□□ 0.79
RPRD1AQ96P16 AL031985.4-201ENST00000642138 673 ntBASIC20■□□□□ 0.79
RPRD1AQ96P16 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RPRD1AQ96P16 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RPRD1AQ96P16 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1AQ96P16 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20■□□□□ 0.79
RPRD1AQ96P16 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20■□□□□ 0.79
RPRD1AQ96P16 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20■□□□□ 0.79
RPRD1AQ96P16 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20■□□□□ 0.79
RPRD1AQ96P16 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1AQ96P16 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPRD1AQ96P16 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.99■□□□□ 0.79
RPRD1AQ96P16 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 NUDT16P1-203ENST00000513809 620 ntBASIC19.99■□□□□ 0.79
RPRD1AQ96P16 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 AP003071.4-201ENST00000562276 1284 ntBASIC19.99■□□□□ 0.79
RPRD1AQ96P16 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 LINC01465-201ENST00000408887 1940 ntBASIC19.99■□□□□ 0.79
RPRD1AQ96P16 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RPRD1AQ96P16 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.98■□□□□ 0.79
RPRD1AQ96P16 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 AC004980.1-204ENST00000429707 299 ntBASIC19.98■□□□□ 0.79
RPRD1AQ96P16 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 TREX1-205ENST00000625293 1783 ntBASIC19.98■□□□□ 0.79
RPRD1AQ96P16 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RPRD1AQ96P16 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.97■□□□□ 0.79
RPRD1AQ96P16 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.97■□□□□ 0.79
RPRD1AQ96P16 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.96■□□□□ 0.79
RPRD1AQ96P16 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms