Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 MIPEPP3-201ENST00000412105 444 ntBASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 TSPY6P-201ENST00000448518 926 ntBASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 AC090192.1-201ENST00000517740 490 ntBASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RTN4IP1Q8WWV3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 GUSBP6-202ENST00000438529 1198 ntBASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RTN4IP1Q8WWV3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 AL031963.3-201ENST00000606441 850 ntBASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 KRT8P20-201ENST00000423953 1409 ntBASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RTN4IP1Q8WWV3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.27■□□□□ 0.2
RTN4IP1Q8WWV3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms