Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 AC091390.4-202ENST00000476426 537 ntBASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SH3RF2Q8TEC5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 ECEL1P2-202ENST00000465689 757 ntBASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 AL049597.2-201ENST00000565575 961 ntBASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.12■□□□□ 0.81
SH3RF2Q8TEC5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 AC073508.3-201ENST00000619697 1419 ntBASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 MFAP1P1-201ENST00000442257 1255 ntBASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 AL445228.2-201ENST00000605589 952 ntBASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 AC009237.14-201ENST00000609975 1594 ntBASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.11■□□□□ 0.81
SH3RF2Q8TEC5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 LINC01465-201ENST00000408887 1940 ntBASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 INGX-201ENST00000359239 846 ntBASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 AC010203.1-204ENST00000548782 407 ntBASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 AL160286.2-201ENST00000567150 934 ntBASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3RF2Q8TEC5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 AC096733.2-201ENST00000609937 1394 ntBASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SH3RF2Q8TEC5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms