Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCHCR1Q8TD31 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 HLA-B-256ENST00000639848 1089 ntBASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCHCR1Q8TD31 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 KRT18P6-201ENST00000555540 1265 ntBASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 AC093503.3-201ENST00000624917 2352 ntBASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 AC120498.9-201ENST00000339021 3867 ntBASIC20.15■□□□□ 0.82
CCHCR1Q8TD31 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CCHCR1Q8TD31 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCHCR1Q8TD31 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCHCR1Q8TD31 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCHCR1Q8TD31 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCHCR1Q8TD31 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.14■□□□□ 0.82
CCHCR1Q8TD31 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 AC060766.5-201ENST00000590539 871 ntBASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 NEFHP1-201ENST00000412845 2629 ntBASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCHCR1Q8TD31 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 AC092368.3-202ENST00000574180 1591 ntBASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 AC116351.2-201ENST00000606540 1585 ntBASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 AC018553.1-201ENST00000616682 1458 ntBASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 AL390719.1-204ENST00000412397 1219 ntBASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.13■□□□□ 0.81
CCHCR1Q8TD31 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms