Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AC036111.1-201ENST00000533973 1582 ntBASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 AL121672.3-201ENST00000608644 468 ntBASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ALMS1Q8TCU4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 PHGDH-210ENST00000641115 1638 ntBASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 AC091304.2-201ENST00000564639 760 ntBASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 AC121338.2-201ENST00000622535 1744 ntBASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ALMS1Q8TCU4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 AL162741.1-201ENST00000565563 1558 ntBASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 SEC1P-202ENST00000473944 940 ntBASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 CLDN5-201ENST00000403084 2357 ntBASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 AC243591.1-201ENST00000452967 1364 ntBASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 AL024507.2-201ENST00000606070 2574 ntBASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 HMGN1P19-201ENST00000436976 333 ntBASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 AC079602.3-201ENST00000623931 403 ntBASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ALMS1Q8TCU4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 AC034232.1-201ENST00000506026 1064 ntBASIC13.07□□□□□ -0.32
ALMS1Q8TCU4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms