Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 MYCNOS-205ENST00000641950 531 ntBASIC18.79■□□□□ 0.6
HIPK4Q8NE63 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK4Q8NE63 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK4Q8NE63 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 AC087633.2-202ENST00000565166 1439 ntBASIC18.77■□□□□ 0.6
HIPK4Q8NE63 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 KRT18P61-201ENST00000585825 1298 ntBASIC18.77■□□□□ 0.6
HIPK4Q8NE63 AL356652.1-201ENST00000615962 565 ntBASIC18.77■□□□□ 0.6
HIPK4Q8NE63 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.77■□□□□ 0.6
HIPK4Q8NE63 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIPK4Q8NE63 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.77■□□□□ 0.59
HIPK4Q8NE63 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIPK4Q8NE63 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIPK4Q8NE63 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIPK4Q8NE63 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 PKD1P1-201ENST00000458669 6805 ntBASIC18.76■□□□□ 0.59
HIPK4Q8NE63 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.76■□□□□ 0.59
HIPK4Q8NE63 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms