Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 FAAHP1-202ENST00000446499 1238 ntBASIC15.16■□□□□ 0.02
C3orf56Q8N813 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 CKBP1-201ENST00000565489 1086 ntBASIC15.16■□□□□ 0.02
C3orf56Q8N813 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 KRT8P10-201ENST00000450021 1447 ntBASIC15.16■□□□□ 0.02
C3orf56Q8N813 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.16■□□□□ 0.02
C3orf56Q8N813 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C3orf56Q8N813 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 AC121338.2-201ENST00000622535 1744 ntBASIC15.15■□□□□ 0.02
C3orf56Q8N813 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.15■□□□□ 0.02
C3orf56Q8N813 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 CR769767.2-201ENST00000622735 460 ntBASIC15.15■□□□□ 0.02
C3orf56Q8N813 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C3orf56Q8N813 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.15■□□□□ 0.02
C3orf56Q8N813 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf56Q8N813 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf56Q8N813 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf56Q8N813 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf56Q8N813 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 AP000593.1-201ENST00000393668 712 ntBASIC15.14■□□□□ 0.01
C3orf56Q8N813 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 TSPY21P-201ENST00000433481 731 ntBASIC15.14■□□□□ 0.01
C3orf56Q8N813 TSPY23P-201ENST00000440136 739 ntBASIC15.14■□□□□ 0.01
C3orf56Q8N813 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf56Q8N813 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf56Q8N813 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 AC006538.3-201ENST00000612495 578 ntBASIC15.14■□□□□ 0.01
C3orf56Q8N813 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 KRT8P45-201ENST00000414328 1447 ntBASIC15.14■□□□□ 0.01
C3orf56Q8N813 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf56Q8N813 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C3orf56Q8N813 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.14■□□□□ 0.01
C3orf56Q8N813 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 AP003041.3-201ENST00000527151 707 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms