Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.13■□□□□ 0.65
CCNYL1Q8N7R7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCNYL1Q8N7R7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 AC022517.1-201ENST00000592429 346 ntBASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCNYL1Q8N7R7 AL161938.1-201ENST00000569833 2180 ntBASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 MIR5787-201ENST00000611784 55 ntBASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 MKRN4P-201ENST00000444706 1521 ntBASIC19.1■□□□□ 0.65
CCNYL1Q8N7R7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 AL390719.1-204ENST00000412397 1219 ntBASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 BX276092.2-201ENST00000417668 665 ntBASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CCNYL1Q8N7R7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms