Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC30.4■■■□□ 2.46
VPS8Q8N3P4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
VPS8Q8N3P4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
VPS8Q8N3P4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.39■■■□□ 2.45
VPS8Q8N3P4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC30.39■■■□□ 2.45
VPS8Q8N3P4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC30.39■■■□□ 2.45
VPS8Q8N3P4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 TSPY23P-201ENST00000440136 739 ntBASIC30.38■■■□□ 2.45
VPS8Q8N3P4 CKBP1-201ENST00000565489 1086 ntBASIC30.38■■■□□ 2.45
VPS8Q8N3P4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC30.38■■■□□ 2.45
VPS8Q8N3P4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC30.38■■■□□ 2.45
VPS8Q8N3P4 AL158211.5-201ENST00000623583 2518 ntBASIC30.37■■■□□ 2.45
VPS8Q8N3P4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC30.37■■■□□ 2.45
VPS8Q8N3P4 PCDHAC2-203ENST00000615316 3011 ntBASIC30.37■■■□□ 2.45
VPS8Q8N3P4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
VPS8Q8N3P4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
VPS8Q8N3P4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
VPS8Q8N3P4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
VPS8Q8N3P4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC30.36■■■□□ 2.45
VPS8Q8N3P4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
VPS8Q8N3P4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC30.36■■■□□ 2.45
VPS8Q8N3P4 AFG3L1P-217ENST00000557444 2447 ntBASIC30.36■■■□□ 2.45
VPS8Q8N3P4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC30.36■■■□□ 2.45
VPS8Q8N3P4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 PRSS44-201ENST00000515154 1146 ntBASIC30.35■■■□□ 2.45
VPS8Q8N3P4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 SLC25A1P4-201ENST00000567977 778 ntBASIC30.35■■■□□ 2.45
VPS8Q8N3P4 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.35■■■□□ 2.45
VPS8Q8N3P4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC30.35■■■□□ 2.45
VPS8Q8N3P4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 CRYGFP-201ENST00000418459 633 ntBASIC30.34■■■□□ 2.45
VPS8Q8N3P4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 NAPSB-206ENST00000562112 1266 ntBASIC30.34■■■□□ 2.45
VPS8Q8N3P4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
VPS8Q8N3P4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 TSPY14P-201ENST00000303979 915 ntBASIC30.33■■■□□ 2.45
VPS8Q8N3P4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms