Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHPFQ8IZ52 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHPFQ8IZ52 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHPFQ8IZ52 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHPFQ8IZ52 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHPFQ8IZ52 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHPFQ8IZ52 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 MFAP1P1-201ENST00000442257 1255 ntBASIC19.73■□□□□ 0.75
CHPFQ8IZ52 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHPFQ8IZ52 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 AC073314.1-201ENST00000568729 2216 ntBASIC19.72■□□□□ 0.75
CHPFQ8IZ52 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.72■□□□□ 0.75
CHPFQ8IZ52 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHPFQ8IZ52 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 DUX4L26-201ENST00000489078 1255 ntBASIC19.71■□□□□ 0.75
CHPFQ8IZ52 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHPFQ8IZ52 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 INGX-201ENST00000359239 846 ntBASIC19.7■□□□□ 0.74
CHPFQ8IZ52 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 AC104076.2-201ENST00000448912 469 ntBASIC19.7■□□□□ 0.74
CHPFQ8IZ52 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 AC091390.4-202ENST00000476426 537 ntBASIC19.7■□□□□ 0.74
CHPFQ8IZ52 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.7■□□□□ 0.74
CHPFQ8IZ52 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
CHPFQ8IZ52 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms