Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 AC026366.1-201ENST00000488803 879 ntBASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 AC233263.1-201ENST00000578059 224 ntBASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE9Q8IYJ1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 KRT18P16-201ENST00000510337 1294 ntBASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 AC069544.1-201ENST00000609399 999 ntBASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 KRT8P8-201ENST00000434750 1448 ntBASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE9Q8IYJ1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPNE9Q8IYJ1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.14■□□□□ 0.66
CPNE9Q8IYJ1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 PRKY-204ENST00000533551 1019 ntBASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms