Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21■□□□□ 0.95
HERC6Q8IVU3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HERC6Q8IVU3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HERC6Q8IVU3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
HERC6Q8IVU3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21■□□□□ 0.95
HERC6Q8IVU3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HERC6Q8IVU3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21■□□□□ 0.95
HERC6Q8IVU3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21■□□□□ 0.95
HERC6Q8IVU3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21■□□□□ 0.95
HERC6Q8IVU3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21■□□□□ 0.95
HERC6Q8IVU3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HERC6Q8IVU3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HERC6Q8IVU3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HERC6Q8IVU3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HERC6Q8IVU3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HERC6Q8IVU3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 AP003041.3-201ENST00000527151 707 ntBASIC20.99■□□□□ 0.95
HERC6Q8IVU3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.99■□□□□ 0.95
HERC6Q8IVU3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HERC6Q8IVU3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 KRT8P8-201ENST00000434750 1448 ntBASIC20.97■□□□□ 0.95
HERC6Q8IVU3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 AC012313.10-201ENST00000623509 926 ntBASIC20.97■□□□□ 0.95
HERC6Q8IVU3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.97■□□□□ 0.95
HERC6Q8IVU3 KRT8P45-201ENST00000414328 1447 ntBASIC20.96■□□□□ 0.95
HERC6Q8IVU3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 AC112907.2-201ENST00000448639 330 ntBASIC20.96■□□□□ 0.95
HERC6Q8IVU3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 ZNF444P1-201ENST00000559497 298 ntBASIC20.96■□□□□ 0.95
HERC6Q8IVU3 AL160286.2-201ENST00000567150 934 ntBASIC20.96■□□□□ 0.95
HERC6Q8IVU3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HERC6Q8IVU3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
HERC6Q8IVU3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms