Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM50Q86XT4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.63■■□□□ 1.05
TRIM50Q86XT4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TRIM50Q86XT4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM50Q86XT4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 TCF3P1-201ENST00000423021 1937 ntBASIC21.61■■□□□ 1.05
TRIM50Q86XT4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TRIM50Q86XT4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 KRT8P41-201ENST00000533985 1514 ntBASIC21.6■■□□□ 1.05
TRIM50Q86XT4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 AC104076.2-201ENST00000448912 469 ntBASIC21.6■■□□□ 1.05
TRIM50Q86XT4 AC006011.2-201ENST00000621313 1158 ntBASIC21.6■■□□□ 1.05
TRIM50Q86XT4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM50Q86XT4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms