Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.51■□□□□ 0.39
SHFQ7M4L6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHFQ7M4L6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.5■□□□□ 0.39
SHFQ7M4L6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SHFQ7M4L6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SHFQ7M4L6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 AL355472.2-201ENST00000422958 438 ntBASIC17.5■□□□□ 0.39
SHFQ7M4L6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.5■□□□□ 0.39
SHFQ7M4L6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.5■□□□□ 0.39
SHFQ7M4L6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.5■□□□□ 0.39
SHFQ7M4L6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 AC005082.1-201ENST00000413042 2259 ntBASIC17.5■□□□□ 0.39
SHFQ7M4L6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.5■□□□□ 0.39
SHFQ7M4L6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHFQ7M4L6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHFQ7M4L6 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 AC018470.1-201ENST00000624790 3129 ntBASIC17.49■□□□□ 0.39
SHFQ7M4L6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.49■□□□□ 0.39
SHFQ7M4L6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHFQ7M4L6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 AC009113.1-201ENST00000570267 2443 ntBASIC17.48■□□□□ 0.39
SHFQ7M4L6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 AC005332.8-201ENST00000622750 2735 ntBASIC17.48■□□□□ 0.39
SHFQ7M4L6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 MIR5787-201ENST00000611784 55 ntBASIC17.48■□□□□ 0.39
SHFQ7M4L6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHFQ7M4L6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SHFQ7M4L6 TEX21P-204ENST00000641479 1693 ntBASIC17.48■□□□□ 0.39
SHFQ7M4L6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms