Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.48■□□□□ 0.55
BLOC1S3Q6QNY0 AC104417.2-201ENST00000562989 1793 ntBASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 AC079598.2-202ENST00000546624 1451 ntBASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 SDHAP1-207ENST00000440850 2000 ntBASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 WIZP1-201ENST00000531444 2299 ntBASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
BLOC1S3Q6QNY0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 AC073210.2-201ENST00000430369 194 ntBASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 AC135050.7-201ENST00000624508 2218 ntBASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
BLOC1S3Q6QNY0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S3Q6QNY0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S3Q6QNY0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S3Q6QNY0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BLOC1S3Q6QNY0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.45■□□□□ 0.54
BLOC1S3Q6QNY0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms