Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NIPAL3Q6P499 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 AC138932.1-201ENST00000534164 6830 ntBASIC17.63■□□□□ 0.41
NIPAL3Q6P499 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 UNC93B4-201ENST00000505679 747 ntBASIC17.63■□□□□ 0.41
NIPAL3Q6P499 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 AC008687.6-201ENST00000596318 630 ntBASIC17.63■□□□□ 0.41
NIPAL3Q6P499 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NIPAL3Q6P499 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 RPS2P52-201ENST00000469610 820 ntBASIC17.62■□□□□ 0.41
NIPAL3Q6P499 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 AC124283.5-201ENST00000624661 1809 ntBASIC17.62■□□□□ 0.41
NIPAL3Q6P499 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NIPAL3Q6P499 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 AP003097.1-201ENST00000530657 1135 ntBASIC17.61■□□□□ 0.41
NIPAL3Q6P499 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 AC120498.8-201ENST00000614275 531 ntBASIC17.61■□□□□ 0.41
NIPAL3Q6P499 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NIPAL3Q6P499 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NIPAL3Q6P499 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms