Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 ARMC10P1-201ENST00000313754 855 ntBASIC20.32■□□□□ 0.84
RNF43Q68DV7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 AC012306.2-201ENST00000609350 630 ntBASIC20.32■□□□□ 0.84
RNF43Q68DV7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF43Q68DV7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF43Q68DV7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF43Q68DV7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF43Q68DV7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF43Q68DV7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF43Q68DV7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF43Q68DV7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF43Q68DV7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF43Q68DV7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF43Q68DV7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF43Q68DV7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF43Q68DV7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 AC004408.2-201ENST00000623613 2777 ntBASIC20.3■□□□□ 0.84
RNF43Q68DV7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 KRT18P35-201ENST00000510488 1269 ntBASIC20.3■□□□□ 0.84
RNF43Q68DV7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 CD177P1-201ENST00000606252 935 ntBASIC20.3■□□□□ 0.84
RNF43Q68DV7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF43Q68DV7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF43Q68DV7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 AL355075.4-201ENST00000554988 638 ntBASIC20.29■□□□□ 0.84
RNF43Q68DV7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 AL353708.3-201ENST00000610272 989 ntBASIC20.29■□□□□ 0.84
RNF43Q68DV7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 AC113410.3-201ENST00000623366 203 ntBASIC20.29■□□□□ 0.84
RNF43Q68DV7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 AL158211.5-201ENST00000623583 2518 ntBASIC20.29■□□□□ 0.84
RNF43Q68DV7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 AC018553.1-201ENST00000616682 1458 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms