Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC29.46■■■□□ 2.31
CDC42BPAQ5VT25 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
CDC42BPAQ5VT25 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CDC42BPAQ5VT25 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC29.46■■■□□ 2.31
CDC42BPAQ5VT25 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC29.45■■■□□ 2.31
CDC42BPAQ5VT25 HBZP1-201ENST00000354915 429 ntBASIC29.45■■■□□ 2.31
CDC42BPAQ5VT25 NPAP1P7-201ENST00000613027 823 ntBASIC29.45■■■□□ 2.31
CDC42BPAQ5VT25 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDC42BPAQ5VT25 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC29.45■■■□□ 2.31
CDC42BPAQ5VT25 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC29.45■■■□□ 2.31
CDC42BPAQ5VT25 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
CDC42BPAQ5VT25 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
CDC42BPAQ5VT25 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC29.45■■■□□ 2.3
CDC42BPAQ5VT25 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC29.45■■■□□ 2.3
CDC42BPAQ5VT25 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CDC42BPAQ5VT25 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CDC42BPAQ5VT25 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 GCSHP2-201ENST00000560971 527 ntBASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 CLN6-214ENST00000636314 442 ntTSL 3 BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CDC42BPAQ5VT25 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 AL136038.3-201ENST00000561909 1096 ntBASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
CDC42BPAQ5VT25 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 TSPY21P-201ENST00000433481 731 ntBASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 TSPY23P-201ENST00000440136 739 ntBASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 AC036111.1-201ENST00000533973 1582 ntBASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 CR769767.2-201ENST00000622735 460 ntBASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 AL031432.5-201ENST00000641059 760 ntBASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
CDC42BPAQ5VT25 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPAQ5VT25 IPPK-202ENST00000375522 882 ntTSL 3 BASIC29.41■■■□□ 2.3
CDC42BPAQ5VT25 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPAQ5VT25 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
CDC42BPAQ5VT25 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC29.41■■■□□ 2.3
CDC42BPAQ5VT25 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPAQ5VT25 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPAQ5VT25 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CDC42BPAQ5VT25 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC29.4■■■□□ 2.3
CDC42BPAQ5VT25 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
CDC42BPAQ5VT25 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC29.39■■■□□ 2.29
CDC42BPAQ5VT25 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
CDC42BPAQ5VT25 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
CDC42BPAQ5VT25 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms