Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 AL138781.2-201ENST00000617896 1843 ntBASIC16.8■□□□□ 0.28
ATPAF1Q5TC12 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 AC007613.1-201ENST00000572811 2597 ntBASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATPAF1Q5TC12 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.78■□□□□ 0.28
ATPAF1Q5TC12 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 LINC01465-201ENST00000408887 1940 ntBASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.77■□□□□ 0.28
ATPAF1Q5TC12 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 KRT8P17-201ENST00000453110 1448 ntBASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.77■□□□□ 0.27
ATPAF1Q5TC12 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.76■□□□□ 0.27
ATPAF1Q5TC12 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms