Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 CYP2T3P-201ENST00000601990 817 ntBASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00242Q5T6M2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 AC090164.3-201ENST00000610780 2143 ntBASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 AL031598.1-201ENST00000561511 1773 ntBASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 WIZP1-201ENST00000531444 2299 ntBASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00242Q5T6M2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 AC116351.2-201ENST00000606540 1585 ntBASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 KRT18P11-201ENST00000435214 1283 ntBASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 C2orf69P4-201ENST00000565394 541 ntBASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 Z98044.1-201ENST00000632503 1764 ntBASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 ZNF815P-204ENST00000434898 1737 ntBASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 AC093525.10-201ENST00000625130 1569 ntBASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00242Q5T6M2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms