Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.61■□□□□ 0.57
PDCD4Q53EL6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 AC005181.1-201ENST00000604782 1256 ntBASIC18.6■□□□□ 0.57
PDCD4Q53EL6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDCD4Q53EL6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 AC073210.2-201ENST00000430369 194 ntBASIC18.59■□□□□ 0.57
PDCD4Q53EL6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDCD4Q53EL6 AC005332.8-201ENST00000622750 2735 ntBASIC18.58■□□□□ 0.57
PDCD4Q53EL6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDCD4Q53EL6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDCD4Q53EL6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PDCD4Q53EL6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.58■□□□□ 0.57
PDCD4Q53EL6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDCD4Q53EL6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDCD4Q53EL6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 AC133552.2-202ENST00000575694 574 ntBASIC18.58■□□□□ 0.56
PDCD4Q53EL6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PDCD4Q53EL6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
PDCD4Q53EL6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms