Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO1Q2MKA7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
RSPO1Q2MKA7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RSPO1Q2MKA7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO1Q2MKA7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO1Q2MKA7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 AL161938.1-201ENST00000569833 2180 ntBASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 KRASP1-201ENST00000407852 552 ntBASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 POU5F1P3-201ENST00000428824 1078 ntBASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 AC128676.1-201ENST00000454392 318 ntBASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 AC133681.1-201ENST00000465482 601 ntBASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 C1QL1P1-201ENST00000568105 661 ntBASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 AL049812.1-201ENST00000432563 2267 ntBASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RSPO1Q2MKA7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 HLA-A-209ENST00000638375 975 ntBASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 TNXA-203ENST00000507684 2038 ntBASIC16.79■□□□□ 0.28
RSPO1Q2MKA7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 AC004264.1-201ENST00000608354 794 ntBASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.78■□□□□ 0.28
RSPO1Q2MKA7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
RSPO1Q2MKA7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.77■□□□□ 0.28
RSPO1Q2MKA7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO1Q2MKA7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RSPO1Q2MKA7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RSPO1Q2MKA7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RSPO1Q2MKA7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO1Q2MKA7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RSPO1Q2MKA7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.77■□□□□ 0.28
RSPO1Q2MKA7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms