Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 AC005181.1-201ENST00000604782 1256 ntBASIC17.14■□□□□ 0.33
ODF4Q2M2E3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.14■□□□□ 0.33
ODF4Q2M2E3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 AC018553.1-201ENST00000616682 1458 ntBASIC17.13■□□□□ 0.33
ODF4Q2M2E3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 AC004911.1-201ENST00000416316 871 ntBASIC17.13■□□□□ 0.33
ODF4Q2M2E3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ODF4Q2M2E3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ODF4Q2M2E3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ODF4Q2M2E3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms