Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CFHR3Q02985 TREX1-205ENST00000625293 1783 ntBASIC15.17■□□□□ 0.02
CFHR3Q02985 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CFHR3Q02985 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.17■□□□□ 0.02
CFHR3Q02985 MESTP1-201ENST00000404287 994 ntBASIC15.17■□□□□ 0.02
CFHR3Q02985 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.17■□□□□ 0.02
CFHR3Q02985 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.17■□□□□ 0.02
CFHR3Q02985 AL355355.2-201ENST00000442321 338 ntBASIC15.17■□□□□ 0.02
CFHR3Q02985 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.17■□□□□ 0.02
CFHR3Q02985 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.17■□□□□ 0.02
CFHR3Q02985 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CFHR3Q02985 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.17■□□□□ 0.02
CFHR3Q02985 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.17■□□□□ 0.02
CFHR3Q02985 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.17■□□□□ 0.02
CFHR3Q02985 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
CFHR3Q02985 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 REXO1L10P-201ENST00000615707 1290 ntBASIC15.17■□□□□ 0.02
CFHR3Q02985 REXO1L12P-201ENST00000622156 912 ntBASIC15.17■□□□□ 0.02
CFHR3Q02985 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.17■□□□□ 0.02
CFHR3Q02985 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CFHR3Q02985 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CFHR3Q02985 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFHR3Q02985 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.16■□□□□ 0.02
CFHR3Q02985 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.16■□□□□ 0.02
CFHR3Q02985 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.16■□□□□ 0.02
CFHR3Q02985 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.16■□□□□ 0.02
CFHR3Q02985 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CFHR3Q02985 Z85996.1-201ENST00000494644 937 ntBASIC15.16■□□□□ 0.02
CFHR3Q02985 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.16■□□□□ 0.02
CFHR3Q02985 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.16■□□□□ 0.02
CFHR3Q02985 AL355075.4-201ENST00000554988 638 ntBASIC15.16■□□□□ 0.02
CFHR3Q02985 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.16■□□□□ 0.02
CFHR3Q02985 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.16■□□□□ 0.02
CFHR3Q02985 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CFHR3Q02985 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.16■□□□□ 0.02
CFHR3Q02985 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFHR3Q02985 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.15■□□□□ 0.02
CFHR3Q02985 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CFHR3Q02985 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CFHR3Q02985 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.15■□□□□ 0.02
CFHR3Q02985 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.15■□□□□ 0.02
CFHR3Q02985 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.15■□□□□ 0.02
CFHR3Q02985 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.15■□□□□ 0.02
CFHR3Q02985 B3GAT3P1-201ENST00000471720 806 ntBASIC15.15■□□□□ 0.02
CFHR3Q02985 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CFHR3Q02985 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.15■□□□□ 0.02
CFHR3Q02985 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.15■□□□□ 0.02
CFHR3Q02985 AL160286.2-201ENST00000567150 934 ntBASIC15.15■□□□□ 0.02
CFHR3Q02985 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.15■□□□□ 0.02
CFHR3Q02985 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.15■□□□□ 0.02
CFHR3Q02985 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CFHR3Q02985 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.15■□□□□ 0.02
CFHR3Q02985 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms