Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.65■□□□□ 0.9
CDR2Q01850 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDR2Q01850 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.65■□□□□ 0.9
CDR2Q01850 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDR2Q01850 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CDR2Q01850 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.65■□□□□ 0.9
CDR2Q01850 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.65■□□□□ 0.9
CDR2Q01850 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.65■□□□□ 0.9
CDR2Q01850 PRKY-204ENST00000533551 1019 ntBASIC20.65■□□□□ 0.9
CDR2Q01850 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.65■□□□□ 0.9
CDR2Q01850 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CDR2Q01850 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDR2Q01850 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDR2Q01850 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDR2Q01850 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.65■□□□□ 0.9
CDR2Q01850 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.65■□□□□ 0.9
CDR2Q01850 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDR2Q01850 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CDR2Q01850 TEX21P-204ENST00000641479 1693 ntBASIC20.64■□□□□ 0.9
CDR2Q01850 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.64■□□□□ 0.9
CDR2Q01850 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.64■□□□□ 0.89
CDR2Q01850 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
CDR2Q01850 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDR2Q01850 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.64■□□□□ 0.89
CDR2Q01850 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.64■□□□□ 0.89
CDR2Q01850 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.64■□□□□ 0.89
CDR2Q01850 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDR2Q01850 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.63■□□□□ 0.89
CDR2Q01850 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 SDHAP1-207ENST00000440850 2000 ntBASIC20.63■□□□□ 0.89
CDR2Q01850 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.63■□□□□ 0.89
CDR2Q01850 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDR2Q01850 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 KRT17P3-201ENST00000420566 1262 ntBASIC20.63■□□□□ 0.89
CDR2Q01850 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.63■□□□□ 0.89
CDR2Q01850 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDR2Q01850 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.63■□□□□ 0.89
CDR2Q01850 MTDHP1-201ENST00000605323 784 ntBASIC20.63■□□□□ 0.89
CDR2Q01850 AC069544.1-201ENST00000609399 999 ntBASIC20.63■□□□□ 0.89
CDR2Q01850 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDR2Q01850 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDR2Q01850 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDR2Q01850 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDR2Q01850 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDR2Q01850 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CDR2Q01850 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDR2Q01850 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR2Q01850 AC141586.3-201ENST00000562166 1838 ntBASIC20.62■□□□□ 0.89
CDR2Q01850 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR2Q01850 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDR2Q01850 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR2Q01850 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDR2Q01850 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.62■□□□□ 0.89
CDR2Q01850 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDR2Q01850 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR2Q01850 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR2Q01850 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDR2Q01850 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.62■□□□□ 0.89
CDR2Q01850 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDR2Q01850 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.62■□□□□ 0.89
CDR2Q01850 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.62■□□□□ 0.89
CDR2Q01850 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.62■□□□□ 0.89
CDR2Q01850 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.62■□□□□ 0.89
CDR2Q01850 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.62■□□□□ 0.89
CDR2Q01850 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms