Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.05■□□□□ 0.32
NKX6-1P78426 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.05■□□□□ 0.32
NKX6-1P78426 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.05■□□□□ 0.32
NKX6-1P78426 AC073195.1-201ENST00000607241 877 ntBASIC17.05■□□□□ 0.32
NKX6-1P78426 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.05■□□□□ 0.32
NKX6-1P78426 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.05■□□□□ 0.32
NKX6-1P78426 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX6-1P78426 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX6-1P78426 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NKX6-1P78426 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
NKX6-1P78426 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX6-1P78426 HCG11-201ENST00000411553 5696 ntBASIC17.04■□□□□ 0.32
NKX6-1P78426 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX6-1P78426 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX6-1P78426 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NKX6-1P78426 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX6-1P78426 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.04■□□□□ 0.32
NKX6-1P78426 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX6-1P78426 UNC93B2-201ENST00000285383 730 ntBASIC17.04■□□□□ 0.32
NKX6-1P78426 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NKX6-1P78426 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX6-1P78426 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.04■□□□□ 0.32
NKX6-1P78426 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.04■□□□□ 0.32
NKX6-1P78426 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
NKX6-1P78426 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.04■□□□□ 0.32
NKX6-1P78426 NBPF21P-201ENST00000425093 1451 ntBASIC17.04■□□□□ 0.32
NKX6-1P78426 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-1P78426 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 PHGDH-210ENST00000641115 1638 ntBASIC17.03■□□□□ 0.32
NKX6-1P78426 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX6-1P78426 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
NKX6-1P78426 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.03■□□□□ 0.32
NKX6-1P78426 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX6-1P78426 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-1P78426 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-1P78426 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NKX6-1P78426 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-1P78426 TFP1-202ENST00000475455 1573 ntBASIC17.02■□□□□ 0.32
NKX6-1P78426 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX6-1P78426 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX6-1P78426 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-1P78426 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.02■□□□□ 0.32
NKX6-1P78426 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NKX6-1P78426 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.02■□□□□ 0.32
NKX6-1P78426 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX6-1P78426 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-1P78426 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-1P78426 AC018553.1-201ENST00000616682 1458 ntBASIC17.02■□□□□ 0.32
NKX6-1P78426 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-1P78426 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-1P78426 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.02■□□□□ 0.32
NKX6-1P78426 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-1P78426 RBM17P1-201ENST00000453646 1190 ntBASIC17.02■□□□□ 0.32
NKX6-1P78426 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX6-1P78426 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NKX6-1P78426 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX6-1P78426 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-1P78426 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX6-1P78426 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX6-1P78426 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX6-1P78426 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX6-1P78426 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
NKX6-1P78426 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX6-1P78426 LINC01568-207ENST00000641790 1380 ntBASIC17.02■□□□□ 0.31
NKX6-1P78426 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX6-1P78426 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.01■□□□□ 0.31
NKX6-1P78426 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NKX6-1P78426 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
NKX6-1P78426 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NKX6-1P78426 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
NKX6-1P78426 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NKX6-1P78426 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms