Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PRAMEP78395 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEP78395 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEP78395 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEP78395 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PRAMEP78395 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.52■□□□□ 0.72
PRAMEP78395 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEP78395 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEP78395 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
PRAMEP78395 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEP78395 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PRAMEP78395 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRAMEP78395 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEP78395 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
PRAMEP78395 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.52■□□□□ 0.72
PRAMEP78395 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.52■□□□□ 0.72
PRAMEP78395 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEP78395 AP003097.1-201ENST00000530657 1135 ntBASIC19.52■□□□□ 0.72
PRAMEP78395 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEP78395 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEP78395 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEP78395 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEP78395 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEP78395 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEP78395 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRAMEP78395 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRAMEP78395 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.52■□□□□ 0.71
PRAMEP78395 HCG11-201ENST00000411553 5696 ntBASIC19.51■□□□□ 0.71
PRAMEP78395 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PRAMEP78395 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PRAMEP78395 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
PRAMEP78395 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEP78395 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.51■□□□□ 0.71
PRAMEP78395 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEP78395 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
PRAMEP78395 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.51■□□□□ 0.71
PRAMEP78395 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 PRKY-204ENST00000533551 1019 ntBASIC19.51■□□□□ 0.71
PRAMEP78395 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.51■□□□□ 0.71
PRAMEP78395 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.51■□□□□ 0.71
PRAMEP78395 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEP78395 Z82202.1-201ENST00000623446 1880 ntBASIC19.51■□□□□ 0.71
PRAMEP78395 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.51■□□□□ 0.71
PRAMEP78395 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.51■□□□□ 0.71
PRAMEP78395 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PRAMEP78395 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEP78395 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEP78395 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PRAMEP78395 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEP78395 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEP78395 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEP78395 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PRAMEP78395 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEP78395 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEP78395 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PRAMEP78395 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.5■□□□□ 0.71
PRAMEP78395 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEP78395 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.5■□□□□ 0.71
PRAMEP78395 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.5■□□□□ 0.71
PRAMEP78395 KRT18P6-201ENST00000555540 1265 ntBASIC19.5■□□□□ 0.71
PRAMEP78395 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEP78395 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PRAMEP78395 AL032819.2-201ENST00000624543 2162 ntBASIC19.5■□□□□ 0.71
PRAMEP78395 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PRAMEP78395 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.5■□□□□ 0.71
PRAMEP78395 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRAMEP78395 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRAMEP78395 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PRAMEP78395 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRAMEP78395 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRAMEP78395 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRAMEP78395 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.49■□□□□ 0.71
PRAMEP78395 KRT17P3-201ENST00000420566 1262 ntBASIC19.49■□□□□ 0.71
PRAMEP78395 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.49■□□□□ 0.71
PRAMEP78395 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PRAMEP78395 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.49■□□□□ 0.71
PRAMEP78395 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRAMEP78395 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.49■□□□□ 0.71
PRAMEP78395 AC008403.3-201ENST00000598924 454 ntBASIC19.49■□□□□ 0.71
PRAMEP78395 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PRAMEP78395 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PRAMEP78395 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRAMEP78395 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
PRAMEP78395 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRAMEP78395 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRAMEP78395 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms