Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RPL39P62891 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RPL39P62891 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RPL39P62891 TEX21P-204ENST00000641479 1693 ntBASIC13.71□□□□□ -0.21
RPL39P62891 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPL39P62891 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
RPL39P62891 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPL39P62891 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
RPL39P62891 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RPL39P62891 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.71□□□□□ -0.22
RPL39P62891 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.71□□□□□ -0.22
RPL39P62891 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
RPL39P62891 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.7□□□□□ -0.22
RPL39P62891 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RPL39P62891 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RPL39P62891 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.7□□□□□ -0.22
RPL39P62891 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 AC004854.2-201ENST00000608450 1441 ntBASIC13.7□□□□□ -0.22
RPL39P62891 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.7□□□□□ -0.22
RPL39P62891 AC090164.3-201ENST00000610780 2143 ntBASIC13.7□□□□□ -0.22
RPL39P62891 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RPL39P62891 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RPL39P62891 PCDHB18P-201ENST00000524813 2368 ntBASIC13.69□□□□□ -0.22
RPL39P62891 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.69□□□□□ -0.22
RPL39P62891 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.69□□□□□ -0.22
RPL39P62891 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.69□□□□□ -0.22
RPL39P62891 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.69□□□□□ -0.22
RPL39P62891 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.69□□□□□ -0.22
RPL39P62891 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.69□□□□□ -0.22
RPL39P62891 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.69□□□□□ -0.22
RPL39P62891 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RPL39P62891 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RPL39P62891 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RPL39P62891 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.69□□□□□ -0.22
RPL39P62891 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RPL39P62891 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPL39P62891 AC141586.3-201ENST00000562166 1838 ntBASIC13.69□□□□□ -0.22
RPL39P62891 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.68□□□□□ -0.22
RPL39P62891 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RPL39P62891 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
RPL39P62891 AC079598.2-202ENST00000546624 1451 ntBASIC13.68□□□□□ -0.22
RPL39P62891 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RPL39P62891 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
RPL39P62891 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.68□□□□□ -0.22
RPL39P62891 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.68□□□□□ -0.22
RPL39P62891 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.68□□□□□ -0.22
RPL39P62891 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 UBE2DNL-204ENST00000602536 740 ntBASIC13.68□□□□□ -0.22
RPL39P62891 AL591742.1-201ENST00000604433 565 ntBASIC13.68□□□□□ -0.22
RPL39P62891 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.68□□□□□ -0.22
RPL39P62891 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.68□□□□□ -0.22
RPL39P62891 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPL39P62891 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPL39P62891 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms