Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3S2P59780 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3S2P59780 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
AP3S2P59780 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
AP3S2P59780 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 AL356652.1-201ENST00000615962 565 ntBASIC16.65■□□□□ 0.26
AP3S2P59780 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3S2P59780 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3S2P59780 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3S2P59780 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3S2P59780 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3S2P59780 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3S2P59780 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.64■□□□□ 0.26
AP3S2P59780 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.64■□□□□ 0.25
AP3S2P59780 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
AP3S2P59780 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.64■□□□□ 0.25
AP3S2P59780 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 AC091799.1-201ENST00000422823 811 ntBASIC16.64■□□□□ 0.25
AP3S2P59780 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.64■□□□□ 0.25
AP3S2P59780 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.64■□□□□ 0.25
AP3S2P59780 AC079140.4-201ENST00000507448 529 ntBASIC16.64■□□□□ 0.25
AP3S2P59780 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.64■□□□□ 0.25
AP3S2P59780 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.64■□□□□ 0.25
AP3S2P59780 AC243732.1-201ENST00000612648 864 ntBASIC16.64■□□□□ 0.25
AP3S2P59780 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 TSPY26P-201ENST00000476365 1326 ntBASIC16.64■□□□□ 0.25
AP3S2P59780 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP3S2P59780 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP3S2P59780 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 AC068880.1-201ENST00000507289 2297 ntBASIC16.63■□□□□ 0.25
AP3S2P59780 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 FZD10-202ENST00000539839 3282 ntBASIC16.63■□□□□ 0.25
AP3S2P59780 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.63■□□□□ 0.25
AP3S2P59780 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.63■□□□□ 0.25
AP3S2P59780 AC010141.2-201ENST00000452426 721 ntBASIC16.63■□□□□ 0.25
AP3S2P59780 CDV3P1-201ENST00000471403 739 ntBASIC16.63■□□□□ 0.25
AP3S2P59780 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3S2P59780 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3S2P59780 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3S2P59780 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3S2P59780 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.63■□□□□ 0.25
AP3S2P59780 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
AP3S2P59780 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
AP3S2P59780 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.63■□□□□ 0.25
AP3S2P59780 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.63■□□□□ 0.25
AP3S2P59780 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP3S2P59780 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.62■□□□□ 0.25
AP3S2P59780 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.62■□□□□ 0.25
AP3S2P59780 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.62■□□□□ 0.25
AP3S2P59780 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP3S2P59780 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms