Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
GFRA1P56159 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 PCDHAC2-203ENST00000615316 3011 ntBASIC17.4■□□□□ 0.38
GFRA1P56159 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.4■□□□□ 0.38
GFRA1P56159 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.4■□□□□ 0.38
GFRA1P56159 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.4■□□□□ 0.38
GFRA1P56159 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.4■□□□□ 0.38
GFRA1P56159 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.4■□□□□ 0.38
GFRA1P56159 AP005242.2-201ENST00000580065 1175 ntBASIC17.4■□□□□ 0.38
GFRA1P56159 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.4■□□□□ 0.38
GFRA1P56159 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.4■□□□□ 0.38
GFRA1P56159 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.4■□□□□ 0.38
GFRA1P56159 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.4■□□□□ 0.38
GFRA1P56159 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 ZNF815P-204ENST00000434898 1737 ntBASIC17.4■□□□□ 0.38
GFRA1P56159 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GFRA1P56159 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GFRA1P56159 KRT8P41-201ENST00000533985 1514 ntBASIC17.4■□□□□ 0.38
GFRA1P56159 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.4■□□□□ 0.38
GFRA1P56159 TREX1-205ENST00000625293 1783 ntBASIC17.4■□□□□ 0.38
GFRA1P56159 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GFRA1P56159 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
GFRA1P56159 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.4■□□□□ 0.38
GFRA1P56159 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA1P56159 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
GFRA1P56159 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.39■□□□□ 0.38
GFRA1P56159 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.39■□□□□ 0.37
GFRA1P56159 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA1P56159 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.39■□□□□ 0.37
GFRA1P56159 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA1P56159 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA1P56159 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA1P56159 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA1P56159 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
GFRA1P56159 AC104417.2-201ENST00000562989 1793 ntBASIC17.39■□□□□ 0.37
GFRA1P56159 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA1P56159 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
GFRA1P56159 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA1P56159 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA1P56159 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.39■□□□□ 0.37
GFRA1P56159 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA1P56159 AL390955.1-201ENST00000428694 934 ntBASIC17.39■□□□□ 0.37
GFRA1P56159 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.39■□□□□ 0.37
GFRA1P56159 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.39■□□□□ 0.37
GFRA1P56159 AC012306.2-201ENST00000609350 630 ntBASIC17.39■□□□□ 0.37
GFRA1P56159 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
GFRA1P56159 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.39■□□□□ 0.37
GFRA1P56159 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA1P56159 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA1P56159 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA1P56159 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.39■□□□□ 0.37
GFRA1P56159 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA1P56159 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA1P56159 KRT8P9-201ENST00000558927 1449 ntBASIC17.38■□□□□ 0.37
GFRA1P56159 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.38■□□□□ 0.37
GFRA1P56159 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
GFRA1P56159 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.38■□□□□ 0.37
GFRA1P56159 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
GFRA1P56159 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.38■□□□□ 0.37
GFRA1P56159 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 FAM207BP-201ENST00000447172 505 ntBASIC17.38■□□□□ 0.37
GFRA1P56159 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.38■□□□□ 0.37
GFRA1P56159 AC097488.1-201ENST00000507834 756 ntBASIC17.38■□□□□ 0.37
GFRA1P56159 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GFRA1P56159 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.38■□□□□ 0.37
GFRA1P56159 LINC01023-201ENST00000606054 436 ntBASIC17.38■□□□□ 0.37
GFRA1P56159 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.38■□□□□ 0.37
GFRA1P56159 AC133561.5-201ENST00000635547 218 ntBASIC17.38■□□□□ 0.37
GFRA1P56159 AC097493.4-201ENST00000641197 219 ntBASIC17.38■□□□□ 0.37
GFRA1P56159 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.38■□□□□ 0.37
GFRA1P56159 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.38■□□□□ 0.37
GFRA1P56159 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.38■□□□□ 0.37
GFRA1P56159 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA1P56159 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
GFRA1P56159 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.37■□□□□ 0.37
GFRA1P56159 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA1P56159 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA1P56159 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA1P56159 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.37■□□□□ 0.37
GFRA1P56159 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA1P56159 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA1P56159 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms