Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH15P55291 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH15P55291 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH15P55291 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH15P55291 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDH15P55291 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDH15P55291 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH15P55291 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH15P55291 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH15P55291 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.04■□□□□ 0.48
CDH15P55291 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH15P55291 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH15P55291 AC053503.5-201ENST00000601508 636 ntBASIC18.04■□□□□ 0.48
CDH15P55291 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH15P55291 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH15P55291 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH15P55291 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CDH15P55291 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH15P55291 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH15P55291 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH15P55291 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH15P55291 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDH15P55291 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CDH15P55291 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.03■□□□□ 0.48
CDH15P55291 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH15P55291 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDH15P55291 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH15P55291 KRT19P1-201ENST00000405746 1186 ntBASIC18.03■□□□□ 0.48
CDH15P55291 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.03■□□□□ 0.48
CDH15P55291 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.03■□□□□ 0.48
CDH15P55291 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.03■□□□□ 0.48
CDH15P55291 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CDH15P55291 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CDH15P55291 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH15P55291 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH15P55291 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH15P55291 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH15P55291 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH15P55291 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
CDH15P55291 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDH15P55291 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH15P55291 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CDH15P55291 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CDH15P55291 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH15P55291 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDH15P55291 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH15P55291 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.02■□□□□ 0.48
CDH15P55291 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.02■□□□□ 0.48
CDH15P55291 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.02■□□□□ 0.48
CDH15P55291 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH15P55291 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH15P55291 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH15P55291 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CDH15P55291 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH15P55291 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CDH15P55291 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH15P55291 AC116050.2-201ENST00000612102 1779 ntBASIC18.02■□□□□ 0.47
CDH15P55291 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 AC099398.1-201ENST00000567919 2776 ntBASIC18.01■□□□□ 0.47
CDH15P55291 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CDH15P55291 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 BID-214ENST00000617586 542 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 AC073111.5-205ENST00000641717 521 ntBASIC18.01■□□□□ 0.47
CDH15P55291 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH15P55291 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH15P55291 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH15P55291 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH15P55291 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms