Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCKAP1LP55160 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCKAP1LP55160 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 SNORA78-201ENST00000459373 127 ntBASIC21.26■□□□□ 0.99
NCKAP1LP55160 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCKAP1LP55160 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCKAP1LP55160 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCKAP1LP55160 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCKAP1LP55160 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCKAP1LP55160 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCKAP1LP55160 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCKAP1LP55160 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.26■□□□□ 0.99
NCKAP1LP55160 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 AL596275.1-201ENST00000423464 877 ntBASIC21.25■□□□□ 0.99
NCKAP1LP55160 TSPY7P-201ENST00000431358 1114 ntBASIC21.25■□□□□ 0.99
NCKAP1LP55160 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 NUDT16P1-203ENST00000513809 620 ntBASIC21.25■□□□□ 0.99
NCKAP1LP55160 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 MIR4497-201ENST00000583208 89 ntBASIC21.25■□□□□ 0.99
NCKAP1LP55160 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
NCKAP1LP55160 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NCKAP1LP55160 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 KRT8P41-201ENST00000533985 1514 ntBASIC21.24■□□□□ 0.99
NCKAP1LP55160 AC093484.2-201ENST00000580996 2166 ntBASIC21.24■□□□□ 0.99
NCKAP1LP55160 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCKAP1LP55160 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCKAP1LP55160 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 MESTP1-201ENST00000404287 994 ntBASIC21.24■□□□□ 0.99
NCKAP1LP55160 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NCKAP1LP55160 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCKAP1LP55160 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCKAP1LP55160 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCKAP1LP55160 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NCKAP1LP55160 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.24■□□□□ 0.99
NCKAP1LP55160 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NCKAP1LP55160 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCKAP1LP55160 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.23■□□□□ 0.99
NCKAP1LP55160 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NCKAP1LP55160 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCKAP1LP55160 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCKAP1LP55160 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NCKAP1LP55160 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCKAP1LP55160 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NCKAP1LP55160 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.23■□□□□ 0.99
NCKAP1LP55160 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.23■□□□□ 0.99
NCKAP1LP55160 AC116562.2-201ENST00000507042 360 ntBASIC21.23■□□□□ 0.99
NCKAP1LP55160 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NCKAP1LP55160 AC026471.5-201ENST00000615068 467 ntBASIC21.23■□□□□ 0.99
NCKAP1LP55160 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.23■□□□□ 0.99
NCKAP1LP55160 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.23■□□□□ 0.99
NCKAP1LP55160 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.23■□□□□ 0.99
NCKAP1LP55160 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCKAP1LP55160 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCKAP1LP55160 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCKAP1LP55160 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NCKAP1LP55160 RCC2P6-201ENST00000526625 1557 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms