Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 AC007322.4-201ENST00000509611 723 ntBASIC18.32■□□□□ 0.52
NR1H2P55055 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.32■□□□□ 0.52
NR1H2P55055 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
NR1H2P55055 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H2P55055 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NR1H2P55055 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H2P55055 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.31■□□□□ 0.52
NR1H2P55055 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 AC090164.3-201ENST00000610780 2143 ntBASIC18.31■□□□□ 0.52
NR1H2P55055 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
NR1H2P55055 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NR1H2P55055 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.31■□□□□ 0.52
NR1H2P55055 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.31■□□□□ 0.52
NR1H2P55055 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.31■□□□□ 0.52
NR1H2P55055 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.31■□□□□ 0.52
NR1H2P55055 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NR1H2P55055 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.31■□□□□ 0.52
NR1H2P55055 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
NR1H2P55055 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H2P55055 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.3■□□□□ 0.52
NR1H2P55055 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NR1H2P55055 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.3■□□□□ 0.52
NR1H2P55055 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NR1H2P55055 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NR1H2P55055 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.3■□□□□ 0.52
NR1H2P55055 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.3■□□□□ 0.52
NR1H2P55055 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NR1H2P55055 AC105036.2-201ENST00000569468 176 ntBASIC18.3■□□□□ 0.52
NR1H2P55055 AC008694.1-202ENST00000636953 945 ntBASIC18.3■□□□□ 0.52
NR1H2P55055 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.3■□□□□ 0.52
NR1H2P55055 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
NR1H2P55055 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.3■□□□□ 0.52
NR1H2P55055 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H2P55055 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NR1H2P55055 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.29■□□□□ 0.52
NR1H2P55055 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NR1H2P55055 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.29■□□□□ 0.52
NR1H2P55055 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
NR1H2P55055 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.29■□□□□ 0.52
NR1H2P55055 GUSBP6-202ENST00000438529 1198 ntBASIC18.29■□□□□ 0.52
NR1H2P55055 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.29■□□□□ 0.52
NR1H2P55055 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 CD99P1-205ENST00000527459 561 ntBASIC18.29■□□□□ 0.52
NR1H2P55055 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 BX119927.1-201ENST00000636596 1552 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms