Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.26■□□□□ 0.83
EPHB3P54753 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB3P54753 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
EPHB3P54753 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHB3P54753 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHB3P54753 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.25■□□□□ 0.83
EPHB3P54753 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.25■□□□□ 0.83
EPHB3P54753 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.25■□□□□ 0.83
EPHB3P54753 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB3P54753 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.25■□□□□ 0.83
EPHB3P54753 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB3P54753 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB3P54753 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
EPHB3P54753 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB3P54753 CA15P1-201ENST00000481698 905 ntBASIC20.25■□□□□ 0.83
EPHB3P54753 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.25■□□□□ 0.83
EPHB3P54753 CKBP1-201ENST00000565489 1086 ntBASIC20.25■□□□□ 0.83
EPHB3P54753 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.25■□□□□ 0.83
EPHB3P54753 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.25■□□□□ 0.83
EPHB3P54753 AL023803.3-201ENST00000615559 522 ntBASIC20.25■□□□□ 0.83
EPHB3P54753 AC006011.2-201ENST00000621313 1158 ntBASIC20.25■□□□□ 0.83
EPHB3P54753 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB3P54753 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.25■□□□□ 0.83
EPHB3P54753 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB3P54753 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
EPHB3P54753 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB3P54753 AC092338.2-201ENST00000568827 1415 ntBASIC20.25■□□□□ 0.83
EPHB3P54753 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB3P54753 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
EPHB3P54753 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB3P54753 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.24■□□□□ 0.83
EPHB3P54753 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.24■□□□□ 0.83
EPHB3P54753 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
EPHB3P54753 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHB3P54753 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
EPHB3P54753 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
EPHB3P54753 AK4P3-201ENST00000418260 669 ntBASIC20.24■□□□□ 0.83
EPHB3P54753 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.24■□□□□ 0.83
EPHB3P54753 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHB3P54753 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
EPHB3P54753 AL353719.1-201ENST00000566847 864 ntBASIC20.24■□□□□ 0.83
EPHB3P54753 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
EPHB3P54753 NTF6B-201ENST00000591913 560 ntBASIC20.24■□□□□ 0.83
EPHB3P54753 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
EPHB3P54753 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB3P54753 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
EPHB3P54753 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
EPHB3P54753 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.23■□□□□ 0.83
EPHB3P54753 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
EPHB3P54753 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
EPHB3P54753 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
EPHB3P54753 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB3P54753 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB3P54753 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
EPHB3P54753 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.23■□□□□ 0.83
EPHB3P54753 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.23■□□□□ 0.83
EPHB3P54753 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.23■□□□□ 0.83
EPHB3P54753 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.23■□□□□ 0.83
EPHB3P54753 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
EPHB3P54753 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB3P54753 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
EPHB3P54753 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHB3P54753 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB3P54753 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB3P54753 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHB3P54753 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB3P54753 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.22■□□□□ 0.83
EPHB3P54753 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB3P54753 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHB3P54753 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.22■□□□□ 0.83
EPHB3P54753 AL512604.3-201ENST00000569583 964 ntBASIC20.22■□□□□ 0.83
EPHB3P54753 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB3P54753 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB3P54753 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB3P54753 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHB3P54753 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB3P54753 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.22■□□□□ 0.83
EPHB3P54753 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB3P54753 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms