Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.73■□□□□ 0.91
RAD23BP54727 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RAD23BP54727 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAD23BP54727 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.72■□□□□ 0.91
RAD23BP54727 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAD23BP54727 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.72■□□□□ 0.91
RAD23BP54727 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.72■□□□□ 0.91
RAD23BP54727 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.72■□□□□ 0.91
RAD23BP54727 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.72■□□□□ 0.91
RAD23BP54727 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.72■□□□□ 0.91
RAD23BP54727 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAD23BP54727 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAD23BP54727 HTR7P1-201ENST00000538670 1336 ntBASIC20.72■□□□□ 0.91
RAD23BP54727 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAD23BP54727 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.72■□□□□ 0.91
RAD23BP54727 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.72■□□□□ 0.91
RAD23BP54727 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAD23BP54727 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAD23BP54727 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.71■□□□□ 0.91
RAD23BP54727 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RAD23BP54727 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.71■□□□□ 0.91
RAD23BP54727 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RAD23BP54727 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAD23BP54727 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.7■□□□□ 0.9
RAD23BP54727 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAD23BP54727 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAD23BP54727 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAD23BP54727 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAD23BP54727 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAD23BP54727 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAD23BP54727 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.7■□□□□ 0.9
RAD23BP54727 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.7■□□□□ 0.9
RAD23BP54727 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.7■□□□□ 0.9
RAD23BP54727 RARRES2P10-201ENST00000564312 460 ntBASIC20.7■□□□□ 0.9
RAD23BP54727 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.7■□□□□ 0.9
RAD23BP54727 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RAD23BP54727 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.7■□□□□ 0.9
RAD23BP54727 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAD23BP54727 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAD23BP54727 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAD23BP54727 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.7■□□□□ 0.9
RAD23BP54727 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.7■□□□□ 0.9
RAD23BP54727 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
RAD23BP54727 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAD23BP54727 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAD23BP54727 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.69■□□□□ 0.9
RAD23BP54727 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.69■□□□□ 0.9
RAD23BP54727 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RAD23BP54727 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RAD23BP54727 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.69■□□□□ 0.9
RAD23BP54727 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.69■□□□□ 0.9
RAD23BP54727 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.69■□□□□ 0.9
RAD23BP54727 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.69■□□□□ 0.9
RAD23BP54727 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.69■□□□□ 0.9
RAD23BP54727 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.69■□□□□ 0.9
RAD23BP54727 HLA-A-209ENST00000638375 975 ntBASIC20.69■□□□□ 0.9
RAD23BP54727 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAD23BP54727 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
RAD23BP54727 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms