Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CD320-202ENST00000537716 1119 ntTSL 2 BASIC27.83■■■□□ 2.05
CLTCL1P53675 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC27.83■■■□□ 2.05
CLTCL1P53675 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC27.83■■■□□ 2.05
CLTCL1P53675 CLN6-204ENST00000564752 900 ntTSL 3 BASIC27.83■■■□□ 2.05
CLTCL1P53675 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC27.83■■■□□ 2.05
CLTCL1P53675 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
CLTCL1P53675 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
CLTCL1P53675 AC005332.1-201ENST00000577698 1310 ntBASIC27.83■■■□□ 2.05
CLTCL1P53675 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC27.83■■■□□ 2.05
CLTCL1P53675 ANKRD18DP-204ENST00000455355 1975 ntBASIC27.83■■■□□ 2.05
CLTCL1P53675 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
CLTCL1P53675 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
CLTCL1P53675 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC27.82■■■□□ 2.04
CLTCL1P53675 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC27.82■■■□□ 2.04
CLTCL1P53675 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC27.82■■■□□ 2.04
CLTCL1P53675 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC27.82■■■□□ 2.04
CLTCL1P53675 SPDYE15P-201ENST00000424157 909 ntBASIC27.82■■■□□ 2.04
CLTCL1P53675 FAM86EP-206ENST00000510506 987 ntBASIC27.82■■■□□ 2.04
CLTCL1P53675 AC116407.4-201ENST00000623319 1061 ntBASIC27.82■■■□□ 2.04
CLTCL1P53675 AL121956.5-201ENST00000625261 221 ntBASIC27.82■■■□□ 2.04
CLTCL1P53675 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CLTCL1P53675 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CLTCL1P53675 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC27.82■■■□□ 2.04
CLTCL1P53675 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CLTCL1P53675 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CLTCL1P53675 TSPY23P-201ENST00000440136 739 ntBASIC27.81■■■□□ 2.04
CLTCL1P53675 AL671277.2-201ENST00000458060 996 ntBASIC27.81■■■□□ 2.04
CLTCL1P53675 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC27.81■■■□□ 2.04
CLTCL1P53675 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
CLTCL1P53675 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC27.81■■■□□ 2.04
CLTCL1P53675 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CLTCL1P53675 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CLTCL1P53675 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC27.81■■■□□ 2.04
CLTCL1P53675 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CLTCL1P53675 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CLTCL1P53675 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CLTCL1P53675 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC27.81■■■□□ 2.04
CLTCL1P53675 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CLTCL1P53675 MED25-212ENST00000618715 1467 ntTSL 5 BASIC27.8■■■□□ 2.04
CLTCL1P53675 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CLTCL1P53675 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC27.8■■■□□ 2.04
CLTCL1P53675 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
CLTCL1P53675 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
CLTCL1P53675 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CLTCL1P53675 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC27.8■■■□□ 2.04
CLTCL1P53675 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC27.8■■■□□ 2.04
CLTCL1P53675 AC091076.1-201ENST00000610741 619 ntBASIC27.8■■■□□ 2.04
CLTCL1P53675 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CLTCL1P53675 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CLTCL1P53675 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
CLTCL1P53675 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
CLTCL1P53675 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC27.79■■■□□ 2.04
CLTCL1P53675 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC27.79■■■□□ 2.04
CLTCL1P53675 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC27.79■■■□□ 2.04
CLTCL1P53675 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC27.79■■■□□ 2.04
CLTCL1P53675 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC27.79■■■□□ 2.04
CLTCL1P53675 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
CLTCL1P53675 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC27.79■■■□□ 2.04
CLTCL1P53675 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CLTCL1P53675 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CLTCL1P53675 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CLTCL1P53675 Telomerase-vert.1-201ENST00000363312 438 ntBASIC27.78■■■□□ 2.04
CLTCL1P53675 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CLTCL1P53675 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CLTCL1P53675 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CLTCL1P53675 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC27.78■■■□□ 2.04
CLTCL1P53675 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC27.78■■■□□ 2.04
CLTCL1P53675 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
CLTCL1P53675 DBP-204ENST00000599385 709 ntTSL 3 BASIC27.78■■■□□ 2.04
CLTCL1P53675 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
CLTCL1P53675 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CLTCL1P53675 ZNF815P-204ENST00000434898 1737 ntBASIC27.78■■■□□ 2.04
CLTCL1P53675 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CLTCL1P53675 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
CLTCL1P53675 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC27.78■■■□□ 2.04
CLTCL1P53675 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CLTCL1P53675 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CLTCL1P53675 SPDYE13P-201ENST00000445314 798 ntBASIC27.78■■■□□ 2.04
CLTCL1P53675 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CLTCL1P53675 AL512604.3-201ENST00000569583 964 ntBASIC27.78■■■□□ 2.04
CLTCL1P53675 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CLTCL1P53675 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CLTCL1P53675 USP39-204ENST00000409766 2033 ntTSL 2 BASIC27.77■■■□□ 2.04
CLTCL1P53675 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CLTCL1P53675 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CLTCL1P53675 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CLTCL1P53675 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CLTCL1P53675 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CLTCL1P53675 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CLTCL1P53675 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms