Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 REXO1L12P-201ENST00000622156 912 ntBASIC20.42■□□□□ 0.86
TUBP50607 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBP50607 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBP50607 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TUBP50607 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.42■□□□□ 0.86
TUBP50607 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.42■□□□□ 0.86
TUBP50607 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.42■□□□□ 0.86
TUBP50607 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.42■□□□□ 0.86
TUBP50607 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TUBP50607 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TUBP50607 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.41■□□□□ 0.86
TUBP50607 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.41■□□□□ 0.86
TUBP50607 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.41■□□□□ 0.86
TUBP50607 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBP50607 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TUBP50607 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.41■□□□□ 0.86
TUBP50607 AC009237.14-201ENST00000609975 1594 ntBASIC20.41■□□□□ 0.86
TUBP50607 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBP50607 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.41■□□□□ 0.86
TUBP50607 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBP50607 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TUBP50607 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.41■□□□□ 0.86
TUBP50607 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBP50607 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TUBP50607 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.4■□□□□ 0.86
TUBP50607 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBP50607 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.4■□□□□ 0.86
TUBP50607 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.4■□□□□ 0.86
TUBP50607 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.4■□□□□ 0.86
TUBP50607 REXO1L10P-201ENST00000615707 1290 ntBASIC20.4■□□□□ 0.86
TUBP50607 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.4■□□□□ 0.86
TUBP50607 AL031985.4-201ENST00000642138 673 ntBASIC20.4■□□□□ 0.86
TUBP50607 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.39■□□□□ 0.86
TUBP50607 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.39■□□□□ 0.86
TUBP50607 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TUBP50607 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TUBP50607 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TUBP50607 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 TSPY15P-201ENST00000457163 923 ntBASIC20.39■□□□□ 0.85
TUBP50607 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.39■□□□□ 0.85
TUBP50607 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.39■□□□□ 0.85
TUBP50607 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.39■□□□□ 0.85
TUBP50607 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.39■□□□□ 0.85
TUBP50607 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TUBP50607 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TUBP50607 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TUBP50607 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.38■□□□□ 0.85
TUBP50607 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 KRT8P8-201ENST00000434750 1448 ntBASIC20.38■□□□□ 0.85
TUBP50607 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.38■□□□□ 0.85
TUBP50607 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
TUBP50607 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TUBP50607 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.38■□□□□ 0.85
TUBP50607 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBP50607 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TUBP50607 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TUBP50607 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TUBP50607 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.37■□□□□ 0.85
TUBP50607 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.37■□□□□ 0.85
TUBP50607 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.37■□□□□ 0.85
TUBP50607 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBP50607 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBP50607 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
TUBP50607 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TUBP50607 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TUBP50607 RBM17P1-201ENST00000453646 1190 ntBASIC20.37■□□□□ 0.85
TUBP50607 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms